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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0096KEGG: cac:CAC2925 HD superfamily hydrolase. (174 aa)    
Predicted Functional Partners:
Swol_0097
KEGG: mta:Moth_0110 dihydropteroate synthase.
 
   
 0.688
Swol_0098
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
 
   
 0.674
Swol_0099
KEGG: xft:PD0186 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase.
 
   
 0.632
Swol_0973
KEGG: dsy:DSY1594 hypothetical protein; Belongs to the UPF0342 family.
  
   
 0.613
Swol_0860
Flagellar protein (FliL)-like protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
   0.589
Swol_0599
KEGG: chy:CHY_1966 hypothetical protein.
  
     0.553
Swol_0459
KEGG: dsy:DSY1902 hypothetical protein.
  
     0.535
ftsH
FtsH-2 peptidase. Metallo peptidase. MEROPS family M41; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins.
     
 0.521
Swol_0240
KEGG: dsy:DSY3033 hypothetical protein.
    
   0.520
Swol_1434
KEGG: mta:Moth_1703 hypothetical protein.
  
     0.520
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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