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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0121KEGG: tte:TTE2165 hypothetical protein. (680 aa)    
Predicted Functional Partners:
Swol_0123
KEGG: mta:Moth_0215 polysaccharide pyruvyl transferase.
 
  
 0.849
Swol_1260
Hypothetical protein; KEGG: btk:BT9727_0789 possible S-layer protein.
  
     0.748
Swol_0755
KEGG: dsy:DSY3327 hypothetical protein.
  
     0.733
Swol_0317
KEGG: mta:Moth_0243 hypothetical protein.
 
     0.728
Swol_0141
Hypothetical protein; KEGG: mta:Moth_1459 Ig-like, group 2.
 
     0.726
Swol_1924
KEGG: mta:Moth_0656 hypothetical protein.
 
     0.723
Swol_0127
Hypothetical protein; KEGG: mta:Moth_1253 O-antigen polymerase.
 
    0.716
Swol_0163
Hypothetical protein; KEGG: mta:Moth_0241 glycosyl hydrolase, BNR repeat.
  
     0.715
Swol_0165
FOG: WD40-like repeat protein; KEGG: mac:MA4287 cell surface protein.
  
     0.712
Swol_0139
Hypothetical protein; KEGG: mta:Moth_2343 copper amine oxidase-like.
  
     0.711
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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