STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0133Hypothetical protein; KEGG: mta:Moth_2343 copper amine oxidase-like. (741 aa)    
Predicted Functional Partners:
Swol_0134
Hypothetical protein; KEGG: mta:Moth_2342 outer membrane protein-like.
   
 0.888
Swol_1798
KEGG: mta:Moth_2145 hypothetical protein.
 
     0.768
Swol_1043
Hypothetical protein; KEGG: mta:Moth_1459 Ig-like, group 2.
 
  
 0.764
Swol_1991
KEGG: mta:Moth_0243 hypothetical protein.
  
     0.754
Swol_1963
KEGG: mta:Moth_2145 hypothetical protein.
  
     0.739
Swol_0317
KEGG: mta:Moth_0243 hypothetical protein.
 
  
 0.733
Swol_0130
KEGG: mta:Moth_2364 peptidase S8 and S53, subtilisin, kexin, sedolisin.
 
  
 0.726
Swol_1742
KEGG: mta:Moth_0243 hypothetical protein.
 
     0.725
Swol_0123
KEGG: mta:Moth_0215 polysaccharide pyruvyl transferase.
  
     0.720
Swol_1184
KEGG: mta:Moth_0243 hypothetical protein.
  
     0.712
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.