STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0141Hypothetical protein; KEGG: mta:Moth_1459 Ig-like, group 2. (758 aa)    
Predicted Functional Partners:
Swol_0139
Hypothetical protein; KEGG: mta:Moth_2343 copper amine oxidase-like.
 
  
 0.790
Swol_0140
KEGG: sth:STH2256 hypothetical protein.
  
     0.772
Swol_1988
KEGG: sth:STH2256 hypothetical protein.
     0.765
Swol_0123
KEGG: mta:Moth_0215 polysaccharide pyruvyl transferase.
  
     0.752
Swol_0121
KEGG: tte:TTE2165 hypothetical protein.
 
     0.726
Swol_2286
Hypothetical protein; KEGG: mta:Moth_0517 N-acetylmuramoyl-L-alanine amidase.
  
     0.719
Swol_0127
Hypothetical protein; KEGG: mta:Moth_1253 O-antigen polymerase.
  
   
 0.707
Swol_0382
KEGG: mta:Moth_1790 copper amine oxidase-like.
  
     0.704
Swol_0289
Beta-lactamase; KEGG: bcz:pE33L466_0098 beta-lactamase.
  
     0.694
Swol_1265
KEGG: chy:CHY_1159 DNA translocase FtsK.
   
 
 0.690
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.