STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0169Uncharacterized protein; KEGG: bcz:BCZK1807 possible murein endopeptidase. (629 aa)    
Predicted Functional Partners:
Swol_0165
FOG: WD40-like repeat protein; KEGG: mac:MA4287 cell surface protein.
  
     0.746
Swol_0298
KEGG: mta:Moth_0188 hypothetical protein.
  
     0.737
Swol_0458
KEGG: pfa:PF10_0351 hypothetical protein.
  
    0.722
Swol_0293
KEGG: mta:Moth_0188 hypothetical protein.
  
     0.717
Swol_0163
Hypothetical protein; KEGG: mta:Moth_0241 glycosyl hydrolase, BNR repeat.
  
     0.708
Swol_1996
cAMP-binding protein; KEGG: ppu:PP3250 transporter, putative.
  
 
   0.707
Swol_2063
KEGG: bca:BCE5566 hypothetical protein.
  
     0.705
Swol_1260
Hypothetical protein; KEGG: btk:BT9727_0789 possible S-layer protein.
  
    0.704
Swol_0755
KEGG: dsy:DSY3327 hypothetical protein.
  
    0.703
Swol_1721
Hypothetical protein; KEGG: ctc:CTC00761 membrane-associated protein.
  
     0.703
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.