STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0175KEGG: dsy:DSY3360 hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (380 aa)    
Predicted Functional Partners:
Swol_0176
KEGG: mta:Moth_2369 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.985
Swol_1118
KEGG: dsy:DSY2068 hypothetical protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.942
Swol_2458
KEGG: dsy:DSY3824 hypothetical protein.
 
 
 0.922
Swol_0134
Hypothetical protein; KEGG: mta:Moth_2342 outer membrane protein-like.
 
 
 0.859
Swol_2457
KEGG: tte:TTE1199 ABC-type transport systems, involved in lipoprotein release, ATPase components.
 
 
 0.784
Swol_0177
KEGG: mta:Moth_2368 transcriptional regulator, TetR family.
 
  
 0.735
Swol_0941
KEGG: blo:BL1135 ATP binding protein of ABC transporter.
 
 
 0.659
Swol_1715
ATPase; KEGG: plt:Plut_1125 ATPase.
  
 
 0.617
Swol_1683
KEGG: mja:MJ0121 SN-glycerol-3-phosphate transport ATP-binding protein (UgpC).
  
 
 0.604
Swol_0943
KEGG: blo:BL1133 protein with weak similarity to components of ABC transporter.
 
 
 0.538
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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