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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0180KEGG: mta:Moth_2329 ABC transporter related. (238 aa)    
Predicted Functional Partners:
Swol_0181
ABC-type multidrug transport system permease component; KEGG: mta:Moth_2330 ABC-2.
 
  
 0.946
Swol_0182
ABC-type multidrug transport system permease component; KEGG: mta:Moth_2331 ABC-2.
 
  
 0.935
Swol_0179
KEGG: mta:Moth_2328 secretion protein HlyD.
 
  
 0.881
Swol_1722
KEGG: sth:STH2107 hypothetical protein.
  
 
 0.775
Swol_2243
ABC-type multidrug transport system ATPase component-like protein; KEGG: tma:TM0765 putative ABC-2 type transport system ATP-binding protein.
 
     0.738
Swol_2242
KEGG: tma:TM0764 putative ABC-2 type transport system permease protein.
  
 
 0.706
Swol_1952
KEGG: mac:MA0870 ABC transporter, ATP-binding protein.
  
    0.674
Swol_1620
KEGG: mta:Moth_1174 ABC transporter related.
  
    0.658
Swol_2449
ABC-type multidrug transport system permease component; KEGG: mta:Moth_1899 ABC-2.
 
  
 0.633
atpD
Sodium-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
    
 
 0.595
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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