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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0185KEGG: mta:Moth_0974 histidine kinase. (395 aa)    
Predicted Functional Partners:
Swol_0186
Response regulator receiver protein; KEGG: mta:Moth_0975 two component transcriptional regulator, LuxR family.
 
 0.992
Swol_0334
KEGG: tdn:Tmden_1034 response regulator receiver domain protein (CheY-like).
  
 
 0.813
Swol_0601
KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator.
  
 
 0.707
Swol_1225
KEGG: mta:Moth_0912 serine/threonine protein kinase.
 
  
 0.610
Swol_1328
PAS/PAC sensor hybrid histidine kinase; KEGG: dsy:DSY3378 hypothetical protein.
 
 
 0.604
Swol_2106
Signal transduction histidine kinase nitrogen specific-like protein; KEGG: gsu:GSU1529 sensory box histidine kinase/response regulator.
  
 
 0.604
Swol_0189
KEGG: tte:TTE0491 flagellar protein.
 
     0.554
Swol_1109
Peptidoglycan glycosyltransferase; KEGG: mta:Moth_1710 penicillin-binding protein 1A.
   
  
 0.554
Swol_0381
KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator.
 
 
 0.543
Swol_1084
Non-ribosomal peptide synthetase modules and related proteins-like protein; KEGG: bld:BLi00402 lichenysin synthetase B; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.538
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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