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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0199Conserved hypothetical protein; KEGG: mta:Moth_0762 protein of unknown function DUF115. (671 aa)    
Predicted Functional Partners:
Swol_0201
KEGG: pcu:pc1566 hypothetical protein.
 
     0.831
Swol_0198
Flagellin and related hook-associated proteins-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.820
Swol_0210
N-acetylneuraminate synthase; KEGG: mhu:Mhun_3098 N-acylneuraminate-9-phosphate synthase.
 
  
 0.772
Swol_0212
KEGG: cac:CAC2186 glycosyltransferase.
 
   
 0.687
Swol_0636
KEGG: bld:BLi00859 hypothetical protein.
  
  
 0.606
Swol_1940
KEGG: bld:BLi00859 hypothetical protein.
  
  
 0.606
Swol_0202
Oxidoreductase; KEGG: fnu:FN1688 oxidoreductase.
 
     0.579
Swol_0193
Flagellin and related hook-associated proteins-like protein; KEGG: chy:CHY_0972 flagellar hook-associated protein 3; Belongs to the bacterial flagellin family.
 
 
 0.575
Swol_0200
Acetyltransferase; KEGG: pmt:PMT0101 acetyltransferase.
     
 0.548
Swol_0203
Aminotransferase; KEGG: pmt:PMT0103 aminotransferase, class III pyridoxal-phosphate dependent; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.487
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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