STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0212KEGG: cac:CAC2186 glycosyltransferase. (331 aa)    
Predicted Functional Partners:
Swol_0210
N-acetylneuraminate synthase; KEGG: mhu:Mhun_3098 N-acylneuraminate-9-phosphate synthase.
 
 
 0.986
Swol_0201
KEGG: pcu:pc1566 hypothetical protein.
 
  
 0.922
Swol_0211
KEGG: par:Psyc_0661 putative LmbE-like protein.
 
    0.814
Swol_0208
Methionyl-tRNA formyltransferase-like protein; KEGG: mhu:Mhun_3097 hypothetical protein.
     0.786
Swol_0229
KEGG: mhu:Mhun_3093 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.688
Swol_0199
Conserved hypothetical protein; KEGG: mta:Moth_0762 protein of unknown function DUF115.
 
   
 0.687
Swol_0209
Hypothetical protein; KEGG: hdu:HD1050 possible ubiquinone/menaquinone biosynthesis methyltransferase.
  
    0.655
Swol_0227
KEGG: mbu:Mbur_1591 polysaccharide biosynthesis protein CapD.
 
   
 0.524
Swol_0228
KEGG: cac:CAC2166 nucleoside-diphosphate-sugar epimerase.
 
    0.427
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.