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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0216KEGG: mac:MA1852 hypothetical protein. (141 aa)    
Predicted Functional Partners:
Swol_0217
Hypothetical protein; KEGG: tte:TTE0712 predicted nucleotidyltransferases.
 
     0.928
Swol_0220
KEGG: cbu:CBU_1021 nucleotidyltransferase substrate-binding protein, putative.
   
 
 0.828
Swol_0145
Hypothetical protein; KEGG: mta:Moth_1397 DNA polymerase, beta-like region.
 
 
 
 0.820
Swol_0219
KEGG: tbd:Tbd_1974 hypothetical protein.
 
     0.678
Swol_0218
KEGG: eli:ELI_09120 hypothetical protein.
 
     0.676
Swol_0215
KEGG: mhu:Mhun_1221 hypothetical protein.
       0.592
Swol_2440
KEGG: ade:Adeh_3520 heat repeat protein.
  
     0.512
Swol_0163
Hypothetical protein; KEGG: mta:Moth_0241 glycosyl hydrolase, BNR repeat.
  
     0.511
Swol_2188
Hypothetical protein.
  
     0.510
Swol_1924
KEGG: mta:Moth_0656 hypothetical protein.
  
     0.495
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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