STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0226KEGG: noc:Noc_2205 PilT protein-like. (145 aa)    
Predicted Functional Partners:
Swol_0225
KEGG: mta:Moth_0686 transcriptional regulator, AbrB family.
       0.786
Swol_0794
Hypothetical protein.
  
     0.690
Swol_0795
KEGG: mta:Moth_2147 2-oxoisovalerate dehydrogenase, E1 component beta subunit.
  
     0.683
Swol_2505
KEGG: xfa:XF2030 hypothetical protein.
 
   
 0.604
Swol_0748
KEGG: mta:Moth_0181 hypothetical protein.
  
     0.574
Swol_2504
KEGG: fra:Francci3_4084 conserved hypothetical protein.
  
   
 0.555
Swol_0145
Hypothetical protein; KEGG: mta:Moth_1397 DNA polymerase, beta-like region.
 
     0.542
Swol_0214
KEGG: cch:Cag_0880 hypothetical protein.
 
   
 0.507
Swol_0223
KEGG: pto:PTO1106 hypothetical regulatory protein.
       0.486
Swol_0224
Hypothetical protein.
       0.486
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.