STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0266KEGG: dsy:DSY3797 hypothetical protein. (319 aa)    
Predicted Functional Partners:
Swol_0267
Electron transfer flavoprotein beta subunit-like protein; KEGG: sdy:SDY_0063 FixA.
 
 0.996
Swol_2122
KEGG: dsy:DSY4304 hypothetical protein.
 0.989
etfB
Electron transfer flavoprotein, beta subunit; Part of an electron transfer flavoprotein involved in syntrophic growth of S.wolfei with butyrate. Probably receives electrons from butyryl-CoA dehydrogenases, and transfers them to the membrane-bound quinone oxidoreductase Swol_0698. Belongs to the ETF beta-subunit/FixA family.
 0.986
Swol_0268
KEGG: tte:TTE0545 Acyl-CoA dehydrogenases.
 
 0.975
Swol_2123
KEGG: dsy:DSY0945 hypothetical protein.
 
 0.935
Swol_1483
butyryl-CoA dehydrogenase; KEGG: dsy:DSY1568 hypothetical protein.
 
 0.932
Swol_0788
KEGG: bce:BC5342 acyl-CoA dehydrogenase, short-chain specific.
 
 0.930
Swol_0488
KEGG: tte:TTE0545 Acyl-CoA dehydrogenases.
 
 0.928
Swol_1841
KEGG: chy:CHY_1350 butyryl-CoA dehydrogenase.
 
 0.912
Swol_2126
KEGG: sth:STH1571 acyl-CoA dehydrogenase, short-chain specific.
 
 0.888
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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