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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0283KEGG: mth:MTH931 hypothetical protein. (151 aa)    
Predicted Functional Partners:
Swol_0285
KEGG: mth:MTH932 hypothetical protein.
 
     0.812
Swol_2034
KEGG: lmf:LMOf2365_2733 hypothetical protein.
  
     0.660
Swol_0284
KEGG: mba:Mbar_A3063 hypothetical protein.
 
     0.598
Swol_1762
KEGG: ctc:CTC01845 hypothetical protein.
  
     0.578
Swol_1838
KEGG: dsy:DSY2469 hypothetical protein.
  
     0.492
Swol_1623
KEGG: ctc:CTC01845 hypothetical protein.
  
     0.491
Swol_0601
KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator.
  
  
 0.446
Swol_2039
KEGG: ctc:CTC00241 hypothetical membrane protein.
  
  
 0.435
Swol_1874
Transcriptional regulator, CarD family; KEGG: cpe:CPE0259 probable transcriptional regulator.
  
   
 0.416
Swol_2015
Integral membrane protein; Probably functions as a manganese efflux pump.
  
     0.401
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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