close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0318KEGG: mta:Moth_1277 small GTP-binding protein domain. (402 aa)    
Predicted Functional Partners:
Swol_1022
KEGG: tte:TTE1568 thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes.
  
 0.970
Swol_1020
KEGG: tte:TTE1073 Biotin synthase and related enzymes.
   
 0.964
Swol_1023
Uncharacterized protein; Ortholog of Thermotoga maritima GenBank Accession Number AAD36341; KEGG: cac:CAC0487 uncharacterized protein, ortholog of Thermotoga maritima (4981823).
 
   
 0.855
Swol_2436
KEGG: det:DET0147 [Fe] hydrogenase, large subunit HymC, putative.
 
   
 0.788
Swol_1017
KEGG: mta:Moth_1717 iron hydrogenase, small subunit.
 
   
 0.786
Swol_1925
KEGG: sat:SYN_01370 iron only hydrogenase large subunit.
 
   
 0.780
gpsA
KEGG: mta:Moth_1320 NAD-dependent glycerol-3-phosphate dehydrogenase-like; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.726
Swol_1926
Hypothetical protein; KEGG: sth:STH3209 iron hydrogenase.
 
    0.669
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
  
  
 0.629
Swol_2260
DNA primase-like protein; KEGG: dsy:DSY3048 hypothetical protein.
  
  
 0.629
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.