STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0321KEGG: tte:TTE0476 hypothetical protein. (225 aa)    
Predicted Functional Partners:
Swol_0320
KEGG: dsy:DSY2102 hypothetical protein.
 
     0.859
GrkA
grkA; KEGG: grkA; spore germination protein, GrkA.
 
  
 0.675
Swol_1414
KEGG: mta:Moth_1358 hypothetical protein.
  
     0.674
Swol_0078
KEGG: tte:TTE2379 germination protein.
 
  
 0.610
Swol_1193
KEGG: dsy:DSY4477 hypothetical protein.
 
  
 0.607
Swol_0627
KEGG: mta:Moth_1375 stage V sporulation AD.
 
  
 0.588
Swol_0628
KEGG: mta:Moth_1374 SpoVA protein.
 
  
 0.512
Swol_1322
Conserved hypothetical protein; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
     0.505
Swol_0077
KEGG: dsy:DSY4477 hypothetical protein.
 
  
 0.498
Swol_0075
KEGG: dsy:DSY2110 hypothetical protein.
 
  
 0.488
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.