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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0335KEGG: rpc:RPC_4604 CheC, inhibitor of MCP methylation. (214 aa)    
Predicted Functional Partners:
cheD
CheD, stimulates methylation of MCP proteins; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
  
 0.987
Swol_0334
KEGG: tdn:Tmden_1034 response regulator receiver domain protein (CheY-like).
 
  
  0.984
Swol_0863
KEGG: bcl:ABC2256 two-component response regulator of modulation of flagellar.
  
 
 0.935
Swol_0355
KEGG: pab:PAB1330 chemotaxis response regulator.
  
 0.925
Swol_1333
KEGG: mta:Moth_0803 response regulator receiver domain protein (CheY-like).
  
 0.925
Swol_1448
Response regulator receiver protein; KEGG: ctc:CTC01729 chemotaxis protein cheY.
  
 0.925
Swol_0876
KEGG: bha:BH2434 inhibition of CheR-mediated methylation of MCPs.
  
  
  0.916
Swol_1327
KEGG: dvu:DVU2770 response regulator.
     
 0.903
Swol_1456
KEGG: dde:Dde_1576 response regulator receiver domain protein (CheY-like).
     
 0.903
Swol_0861
KEGG: dsy:DSY2982 hypothetical protein.
  
 
 0.884
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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