STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0341KEGG: tma:TM0202 putative sulfonate transport system substrate-binding protein. (323 aa)    
Predicted Functional Partners:
Swol_0340
KEGG: tma:TM0203 putative sulfonate transport system permease protein.
 
  
 0.989
Swol_0339
KEGG: tma:TM0204 putative sulfonate transport system ATP-binding protein.
 
  
 0.970
Swol_2054
KEGG: cpe:CPE1014 probable flavoprotein.
  
  
 0.562
Swol_0337
KEGG: tdn:Tmden_0930 metal dependent phosphohydrolase.
       0.473
Swol_0338
KEGG: ava:Ava_2117 beta-lactamase-like.
       0.473
Swol_0342
2-octaprenylphenol hydroxylase; KEGG: bca:BCE4898 ABC1 family protein.
     
 0.467
Swol_0687
uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase; KEGG: dsy:DSY2224 hypothetical protein.
  
  
 0.446
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.