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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0356cob(I)yrinic acid a,c-diamide adenosyltransferase; KEGG: dsy:DSY1853 cob(I)alamin adenosyltransferase. (187 aa)    
Predicted Functional Partners:
Swol_1405
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; KEGG: cac:CAC1372 cobalamin biosynthesis enzyme CobT.
 
   
 0.811
Swol_0355
KEGG: pab:PAB1330 chemotaxis response regulator.
       0.738
Swol_0687
uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase; KEGG: dsy:DSY2224 hypothetical protein.
    
 0.718
Swol_1442
Methionine synthase (B12-dependent); KEGG: pca:Pcar_2722 5-methyltetrahydrofolate-homocysteine methyltransferase, truncation.
 
   
 0.642
Swol_0357
Hypothetical protein.
       0.495
hisI
KEGG: chy:CHY_1091 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; In the N-terminal section; belongs to the PRA-CH family.
      
 0.483
Swol_1373
Precorrin-6B methylase 2-like protein; KEGG: gme:Gmet_0481 precorrin-6y C5,15-methyltransferase, subunit CbiE.
     
 0.424
Swol_2164
Nitroreductase; KEGG: mta:Moth_1834 nitroreductase.
 
   
 0.417
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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