STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0393KEGG: dsy:DSY0933 hypothetical protein. (93 aa)    
Predicted Functional Partners:
Swol_1075
KEGG: dsy:DSY2033 hypothetical protein.
 
 
 0.895
Swol_0286
KEGG: gka:GK2354 hypothetical protein.
 
 
 0.803
Swol_0392
KEGG: tde:TDE0662 hypothetical protein.
     
 0.803
Swol_0151
KEGG: dsy:DSY2308 hypothetical protein.
 
 
   0.632
Swol_1182
KEGG: spb:M28_Spy0445 ParE-domain protein.
 
 
   0.623
Swol_0119
KEGG: mta:Moth_1940 hypothetical protein.
  
 
 0.563
Swol_0603
KEGG: dsy:DSY2774 hypothetical protein.
  
     0.425
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.