STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0398KEGG: gsu:GSU0089 heterodisulfide reductase subunit. (70 aa)    
Predicted Functional Partners:
Swol_0395
Succinate dehydrogenase subunit C; KEGG: mta:Moth_0810 protein of unknown function DUF224, cysteine-rich region.
 
 0.998
Swol_0397
KEGG: chy:CHY_0930 heterodisulfide reductase, subunit A, selenocysteine-containing.
 
 0.998
Swol_0394
KEGG: mta:Moth_0809 4Fe-4S ferredoxin, iron-sulfur binding.
 
 0.995
Swol_0400
KEGG: mta:Moth_0814 4Fe-4S ferredoxin, iron-sulfur binding.
 
  
 0.992
Swol_0396
KEGG: mta:Moth_0811 heterodisulfide reductase subunit.
 
 
 0.986
Swol_0401
KEGG: mta:Moth_0815 4Fe-4S ferredoxin, iron-sulfur binding.
 
 
 0.914
Swol_0402
KEGG: mta:Moth_0816 oxidoreductase FAD/NAD(P)-binding.
 
 
 0.900
Swol_0399
KEGG: chy:CHY_0931 hydrogenase, methyl-violgen-reducing type, delta subunit, selenocysteine-containing.
 
     0.866
Swol_2499
Multimeric flavodoxin WrbA-like protein; KEGG: afu:AF1896 iron-sulfur flavoprotein (isf-3).
  
     0.557
pyrK
Dihydroorotate oxidase B, electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
  
 
 0.448
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.