STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0401KEGG: mta:Moth_0815 4Fe-4S ferredoxin, iron-sulfur binding. (339 aa)    
Predicted Functional Partners:
Swol_0402
KEGG: mta:Moth_0816 oxidoreductase FAD/NAD(P)-binding.
   
 0.993
Swol_0400
KEGG: mta:Moth_0814 4Fe-4S ferredoxin, iron-sulfur binding.
 
   
 0.945
Swol_0399
KEGG: chy:CHY_0931 hydrogenase, methyl-violgen-reducing type, delta subunit, selenocysteine-containing.
 
 
 0.940
Swol_0397
KEGG: chy:CHY_0930 heterodisulfide reductase, subunit A, selenocysteine-containing.
 
 
 0.929
Swol_0398
KEGG: gsu:GSU0089 heterodisulfide reductase subunit.
 
 
 0.914
Swol_0395
Succinate dehydrogenase subunit C; KEGG: mta:Moth_0810 protein of unknown function DUF224, cysteine-rich region.
 
 
 0.908
Swol_0396
KEGG: mta:Moth_0811 heterodisulfide reductase subunit.
 
 
 0.903
Swol_0394
KEGG: mta:Moth_0809 4Fe-4S ferredoxin, iron-sulfur binding.
 
     0.881
Swol_0698
Putative iron-sulfur-binding reductase; Oxidoreductase involved in syntrophic growth of S.wolfei with butyrate. Is presumed to link the electron flow from butyryl-CoA dehydrogenases to the membrane, in conjunction with the electron transfer flavoprotein EtfAB. May transfer electrons to the menaquinone pool of the membrane.
     
 0.443
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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