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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0403KEGG: atc:AGR_L_3273 probable integral membrane transport protein. (279 aa)    
Predicted Functional Partners:
Swol_0404
KEGG: rsp:RSP_3673 ABC sugar transporter, inner membrane subunit.
 
0.997
Swol_0409
KEGG: cpe:CPE2345 probable maltose ABC transportor; Belongs to the ABC transporter superfamily.
 
 0.993
Swol_0405
ABC-type sugar transport system periplasmic component-like protein; KEGG: tte:TTE0799 Sugar-binding periplasmic proteins/domains.
 
 
 0.991
Swol_2478
KEGG: pho:PH1350 thiamine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.741
Swol_2481
KEGG: tde:TDE0375 ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.648
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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