STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0405ABC-type sugar transport system periplasmic component-like protein; KEGG: tte:TTE0799 Sugar-binding periplasmic proteins/domains. (438 aa)    
Predicted Functional Partners:
Swol_0404
KEGG: rsp:RSP_3673 ABC sugar transporter, inner membrane subunit.
 
 0.999
Swol_0403
KEGG: atc:AGR_L_3273 probable integral membrane transport protein.
 
 
 0.991
Swol_0409
KEGG: cpe:CPE2345 probable maltose ABC transportor; Belongs to the ABC transporter superfamily.
 
 
 0.988
Swol_0425
KEGG: eca:ECA1461 putative sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.929
Swol_0414
KEGG: fnu:FN1898 sugar transport ATP-binding protein.
 
  
 0.925
Swol_0423
KEGG: ret:RHE_PE00289 probable sugar ABC transporter, substrate-binding protein.
 
  
 0.668
Swol_0413
KEGG: fnu:FN1899 hypothetical lipoprotein.
  
  
 0.559
Swol_2478
KEGG: pho:PH1350 thiamine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    0.544
Swol_2556
KEGG: gka:GK2980 branched chain amino acid ABC transporter (substrate-binding protein).
  
  
 0.518
Swol_0601
KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator.
     
 0.492
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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