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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0408KEGG: dsy:DSY3569 nitrogenase subunit NifH; Belongs to the NifH/BchL/ChlL family. (254 aa)    
Predicted Functional Partners:
Swol_0407
Nitrogenase molybdenum-iron protein alpha and beta chains-like protein; KEGG: dsy:DSY3837 putative nitrogenase iron-molybdenum cofactor biosynthesis protein NifE.
 
 
 0.993
Swol_0406
KEGG: dsy:DSY3836 hypothetical protein.
 
 
 0.985
hcp
Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
  
 0.941
Swol_1007
KEGG: mta:Moth_1764 glutamine synthetase, type I.
   
 
 0.915
Swol_1787
KEGG: mta:Moth_2299 glutamine synthetase, type I.
   
 
 0.915
Swol_1521
KEGG: sth:STH729 cytochrome C nitrite reductase catalytic subunit; Belongs to the cytochrome c-552 family.
     
 0.912
Swol_1522
Respiratory nitrite reductase specific menaquinol--cytochrome-c reductase (NrfH) precursor; KEGG: dsy:DSY2471 cytochrome c nitrite reductase small subunit NrfH.
     
 0.911
Swol_2170
KEGG: sat:SYN_01242 glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.908
Swol_1555
Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
 0.800
Swol_1531
KEGG: dsy:DSY3437 hypothetical protein.
  
  
 0.575
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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