Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Swol_0414KEGG: fnu:FN1898 sugar transport ATP-binding protein. (528 aa)    
Predicted Functional Partners:
Swol_0425
KEGG: eca:ECA1461 putative sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.993
Swol_0415
KEGG: fnu:FN1897 ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.974
Swol_0416
KEGG: fnu:FN1896 ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.958
Swol_0423
KEGG: ret:RHE_PE00289 probable sugar ABC transporter, substrate-binding protein.
 
 
 0.946
Swol_0424
KEGG: tte:TTE0764 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 
 0.931
Swol_0405
ABC-type sugar transport system periplasmic component-like protein; KEGG: tte:TTE0799 Sugar-binding periplasmic proteins/domains.
 
  
 0.925
Swol_0404
KEGG: rsp:RSP_3673 ABC sugar transporter, inner membrane subunit.
  
 
 0.922
Swol_0413
KEGG: fnu:FN1899 hypothetical lipoprotein.
 
  
 0.888
Swol_2228
KEGG: mta:Moth_1950 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.773
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
   
 
 0.770
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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