Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Swol_0428KEGG: tde:TDE0387 (R)-hydroxyglutaryl-CoA dehydratase activator. (256 aa)    
Predicted Functional Partners:
Swol_0427
KEGG: tde:TDE0392 (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative.
 
 0.979
Swol_0410
KEGG: gsu:GSU2519 (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit, putative.
 
 0.919
Swol_0412
KEGG: tde:TDE0389 (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative.
 
 0.908
Swol_2559
KEGG: mta:Moth_1151 hypothetical protein.
     0.889
Swol_0450
KEGG: pca:Pcar_2726 hypothetical protein.
  
 
 0.566
Swol_0631
KEGG: mta:Moth_1371 hypothetical protein.
   
 0.418
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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