STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0441KEGG: chy:CHY_1645 hypothetical protein. (161 aa)    
Predicted Functional Partners:
Swol_0440
Aminotransferase; KEGG: sth:STH768 putative class-III aminotransferase.
 
     0.787
Swol_0442
KEGG: chy:CHY_2418 DegV family protein.
       0.783
Swol_1202
Hypothetical protein; KEGG: cac:CAC3587 DNA replication protein DnaD.
  
     0.773
Swol_0864
KEGG: dsy:DSY2979 hypothetical protein.
  
     0.764
Swol_1201
KEGG: tte:TTE2774 replicative DNA helicase.
  
     0.751
Swol_0973
KEGG: dsy:DSY1594 hypothetical protein; Belongs to the UPF0342 family.
  
     0.741
Swol_0191
Hypothetical protein.
  
     0.723
Swol_0676
KEGG: dsy:DSY2235 hypothetical protein; Belongs to the FPP/GGPP synthase family.
  
     0.722
Swol_2047
KEGG: mta:Moth_1895 alkylhydroperoxidase AhpD core.
  
     0.715
Swol_1927
KEGG: son:SO3922 formate dehydrogenase, putative.
  
     0.712
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.