STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0487KEGG: reu:Reut_B3869 MaoC-like dehydratase. (151 aa)    
Predicted Functional Partners:
Swol_0488
KEGG: tte:TTE0545 Acyl-CoA dehydrogenases.
  
 0.631
Swol_1899
KEGG: tte:TTE0061 beta-galactosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.564
Swol_0025
KEGG: aci:ACIAD1699 conserved hypothetical protein; putative protein involved in aromatic compounds catabolism.
 
  
 0.534
Swol_1084
Non-ribosomal peptide synthetase modules and related proteins-like protein; KEGG: bld:BLi00402 lichenysin synthetase B; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.534
Swol_0378
KEGG: bcl:ABC2714 isocitrate dehydrogenase.
  
 0.487
Swol_2146
KEGG: mac:MA3792 acetolactate synthase large subunit.
   
 0.436
Swol_0249
KEGG: chy:CHY_0171 hypothetical protein.
    
  0.408
Swol_1169
KEGG: mta:Moth_0736 peptidase S1 and S6, chymotrypsin/Hap.
    
  0.408
Swol_2184
Trypsin-like serine protease; KEGG: oih:OB1100 hypothetical protein.
    
  0.408
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
   
 
 0.401
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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