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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0555KEGG: mta:Moth_1531 hypothetical protein. (194 aa)    
Predicted Functional Partners:
Swol_0553
KEGG: chy:CHY_2004 putative sporulation protein.
 
  
 0.999
Swol_0554
KEGG: mta:Moth_1532 hypothetical protein.
 
  
 0.978
Swol_0556
Hypothetical protein; KEGG: mta:Moth_1530 stage III sporulation protein AG.
 
  
 0.968
Swol_0557
Hypothetical protein; KEGG: tte:TTE1290 stage III sporulation protein AH.
 
  
 0.951
Swol_0551
KEGG: mta:Moth_1535 hypothetical protein.
 
  
 0.916
Swol_0552
KEGG: tte:TTE1285 hypothetical protein.
  
  
 0.878
Swol_1133
KEGG: mta:Moth_1152 hypothetical protein.
  
    0.765
Swol_0562
KEGG: mta:Moth_1522 protein of unknown function DUF322.
 
    0.748
Swol_1786
KEGG: mta:Moth_2110 hypothetical protein.
  
     0.740
Swol_0550
KEGG: tte:TTE1283 stage III sporulation protein spoIIIAA.
  
  
 0.677
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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