STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0572KEGG: noc:Noc_2743 hypothetical protein. (187 aa)    
Predicted Functional Partners:
Swol_0573
KEGG: noc:Noc_2744 hypothetical protein.
       0.782
Swol_0571
Hypothetical protein.
       0.773
Swol_0794
Hypothetical protein.
 
 
 
 0.666
Swol_1661
KEGG: tde:TDE1838 hypothetical protein.
 
 
 
 0.649
Swol_0219
KEGG: tbd:Tbd_1974 hypothetical protein.
 
 
 
 0.581
Swol_0218
KEGG: eli:ELI_09120 hypothetical protein.
 
     0.470
Swol_0621
KEGG: mta:Moth_0484 YcfA-like.
   
 
 0.470
Swol_1010
KEGG: mma:MM0032 hypothetical protein.
   
 
 0.470
Swol_2265
KEGG: mta:Moth_0357 hypothetical protein.
  
     0.464
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.