Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0591KEGG: tte:TTE1305 hypothetical protein. (365 aa)    
Predicted Functional Partners:
Swol_0592
KEGG: tte:TTE1306 hypothetical protein.
 
  
 0.950
Swol_0594
KEGG: tte:TTE1308 hypothetical protein.
 
     0.848
Swol_0596
KEGG: tte:TTE1309 hypothetical protein.
 
     0.843
Swol_0593
KEGG: chy:CHY_1975 glycosyltransferase, group 2 family.
 
     0.833
Swol_0673
KEGG: tte:TTE0948 hypothetical protein.
 
     0.772
Swol_1336
KEGG: mta:Moth_1325 hypothetical protein.
  
     0.546
Swol_0590
Response regulator receiver protein; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
       0.536
Swol_2226
Hypothetical protein; KEGG: tfu:Tfu_2852 putative integral membrane protein.
  
     0.536
Swol_0589
SpoIVB peptidase. Serine peptidase. MEROPS family S55; KEGG: dsy:DSY2342 hypothetical protein.
       0.422
Swol_0963
KEGG: tte:TTE1573 hypothetical protein.
  
     0.410
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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