STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0592KEGG: tte:TTE1306 hypothetical protein. (300 aa)    
Predicted Functional Partners:
Swol_0591
KEGG: tte:TTE1305 hypothetical protein.
 
  
 0.950
Swol_0594
KEGG: tte:TTE1308 hypothetical protein.
 
     0.871
Swol_0593
KEGG: chy:CHY_1975 glycosyltransferase, group 2 family.
 
     0.863
Swol_0596
KEGG: tte:TTE1309 hypothetical protein.
 
     0.857
Swol_0673
KEGG: tte:TTE0948 hypothetical protein.
 
     0.779
Swol_0599
KEGG: chy:CHY_1966 hypothetical protein.
 
     0.645
Swol_0052
KEGG: tte:TTE1657 hypothetical protein.
  
     0.628
Swol_2226
Hypothetical protein; KEGG: tfu:Tfu_2852 putative integral membrane protein.
  
     0.587
Swol_0973
KEGG: dsy:DSY1594 hypothetical protein; Belongs to the UPF0342 family.
  
     0.549
Swol_1340
KEGG: mta:Moth_1327 protein of unknown function DUF1614.
  
     0.543
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.