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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0599KEGG: chy:CHY_1966 hypothetical protein. (201 aa)    
Predicted Functional Partners:
Swol_0598
KEGG: tte:TTE1311 hypothetical protein.
       0.798
Swol_0915
Response regulator receiver protein; KEGG: mta:Moth_1106 hypothetical protein.
  
     0.755
Swol_0563
KEGG: chy:CHY_1995 hypothetical protein.
  
     0.725
Swol_1434
KEGG: mta:Moth_1703 hypothetical protein.
  
     0.696
Swol_0973
KEGG: dsy:DSY1594 hypothetical protein; Belongs to the UPF0342 family.
  
     0.695
Swol_0592
KEGG: tte:TTE1306 hypothetical protein.
 
     0.645
Swol_1148
KEGG: chy:CHY_0956 hypothetical protein.
  
     0.614
Swol_1786
KEGG: mta:Moth_2110 hypothetical protein.
  
     0.605
Swol_1340
KEGG: mta:Moth_1327 protein of unknown function DUF1614.
  
     0.597
Swol_1133
KEGG: mta:Moth_1152 hypothetical protein.
  
     0.582
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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