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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0601KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator. (1442 aa)    
Predicted Functional Partners:
Swol_0600
Response regulator receiver modulated diguanylate cyclase; KEGG: gsu:GSU2313 response regulator.
 
0.991
Swol_2441
KEGG: tma:TM1655 response regulator DrrA.
 
 
 0.991
Swol_1327
KEGG: dvu:DVU2770 response regulator.
 
 
0.982
Swol_1456
KEGG: dde:Dde_1576 response regulator receiver domain protein (CheY-like).
 
 
0.981
Swol_1793
KEGG: sat:SYN_02359 serine phosphatase RsbU, regulator of sigma subunit.
  
  
 0.981
Swol_0011
KEGG: mta:Moth_0689 putative PAS/PAC sensor protein.
 
 
 0.980
Swol_0192
KEGG: mta:Moth_0746 flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
  
  
 0.980
Swol_0353
Putative CheA signal transduction histidine kinases; KEGG: mag:amb1466 predicted ATPase.
 
 
 0.980
Swol_1681
KEGG: tte:TTE2474 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain.
 
 
0.980
Swol_2177
Response regulator receiver protein; KEGG: dsy:DSY1212 hypothetical protein.
 
 
0.980
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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