STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0603KEGG: dsy:DSY2774 hypothetical protein. (104 aa)    
Predicted Functional Partners:
Swol_0604
KEGG: dsy:DSY2773 hypothetical protein.
 
  
 0.926
Swol_1728
KEGG: mja:MJ0435 hypothetical protein.
  
     0.603
Swol_1729
KEGG: mba:Mbar_A2482 hypothetical protein.
 
  
 0.590
Swol_0602
KEGG: mta:Moth_2414 inorganic diphosphatase.
       0.510
Swol_1102
KEGG: mja:MJ0435 hypothetical protein.
  
     0.492
Swol_1103
KEGG: efa:EF2534 hypothetical protein.
 
  
 0.487
Swol_2195
KEGG: dsy:DSY0809 hypothetical protein.
  
     0.471
Swol_0605
Uncharacterized membrane protein; KEGG: mta:Moth_1503 required for dissolution of the septal cell wall; RBL05740.
       0.438
Swol_0393
KEGG: dsy:DSY0933 hypothetical protein.
  
     0.425
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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