STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0620KEGG: mac:MA0764 hypothetical protein. (72 aa)    
Predicted Functional Partners:
Swol_0621
KEGG: mta:Moth_0484 YcfA-like.
 
 
 
 0.970
Swol_1010
KEGG: mma:MM0032 hypothetical protein.
 
 
 
 0.866
Swol_1009
KEGG: mhu:Mhun_2778 protein of unknown function UPF0150.
  
     0.773
Swol_1541
KEGG: mhu:Mhun_2778 protein of unknown function UPF0150.
  
     0.773
Swol_2504
KEGG: fra:Francci3_4084 conserved hypothetical protein.
  
     0.692
Swol_0794
Hypothetical protein.
 
 
 
 0.688
Swol_2505
KEGG: xfa:XF2030 hypothetical protein.
  
     0.573
Swol_0795
KEGG: mta:Moth_2147 2-oxoisovalerate dehydrogenase, E1 component beta subunit.
  
     0.545
Swol_0622
KEGG: bfs:BF3689 putative transferase.
       0.538
Swol_1661
KEGG: tde:TDE1838 hypothetical protein.
 
 
 
 0.513
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.