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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0654KEGG: mta:Moth_0818 sodium/calcium exchanger membrane region. (336 aa)    
Predicted Functional Partners:
Swol_0655
KEGG: ser:SERP1381 hypothetical protein; Belongs to the UPF0342 family.
       0.632
Swol_1786
KEGG: mta:Moth_2110 hypothetical protein.
  
     0.587
Swol_0653
Histidinol-phosphatase; KEGG: mta:Moth_0817 histidinol phosphate phosphatase, HisJ; Belongs to the PHP hydrolase family. HisK subfamily.
       0.568
Swol_2390
KEGG: dsy:DSY3258 hypothetical protein.
 
     0.485
Swol_0471
KEGG: chy:CHY_0543 hypothetical protein; Belongs to the UPF0473 family.
  
     0.419
Swol_1148
KEGG: chy:CHY_0956 hypothetical protein.
  
     0.412
Swol_1396
KEGG: mta:Moth_1344 hypothetical protein.
  
     0.410
Swol_1178
KEGG: gvi:gll0383 probable potassium efflux transporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.406
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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