Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Swol_0039 | Swol_0667 | Swol_0039 | Swol_0667 | KEGG: mta:Moth_2265 Orn/Lys/Arg decarboxylase, major region. | Arginine decarboxylase; KEGG: chy:CHY_1622 pyruvoyl-dependent arginine decarboxylase. | 0.900 |
Swol_0039 | Swol_0669 | Swol_0039 | Swol_0669 | KEGG: mta:Moth_2265 Orn/Lys/Arg decarboxylase, major region. | Agmatinase; KEGG: dsy:DSY0233 hypothetical protein; Belongs to the arginase family. | 0.942 |
Swol_0666 | Swol_0667 | Swol_0666 | Swol_0667 | KEGG: chy:CHY_1527 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Arginine decarboxylase; KEGG: chy:CHY_1622 pyruvoyl-dependent arginine decarboxylase. | 0.469 |
Swol_0666 | speE | Swol_0666 | Swol_0668 | KEGG: chy:CHY_1527 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.433 |
Swol_0667 | Swol_0039 | Swol_0667 | Swol_0039 | Arginine decarboxylase; KEGG: chy:CHY_1622 pyruvoyl-dependent arginine decarboxylase. | KEGG: mta:Moth_2265 Orn/Lys/Arg decarboxylase, major region. | 0.900 |
Swol_0667 | Swol_0666 | Swol_0667 | Swol_0666 | Arginine decarboxylase; KEGG: chy:CHY_1622 pyruvoyl-dependent arginine decarboxylase. | KEGG: chy:CHY_1527 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.469 |
Swol_0667 | Swol_0669 | Swol_0667 | Swol_0669 | Arginine decarboxylase; KEGG: chy:CHY_1622 pyruvoyl-dependent arginine decarboxylase. | Agmatinase; KEGG: dsy:DSY0233 hypothetical protein; Belongs to the arginase family. | 0.968 |
Swol_0667 | speE | Swol_0667 | Swol_0668 | Arginine decarboxylase; KEGG: chy:CHY_1622 pyruvoyl-dependent arginine decarboxylase. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.754 |
Swol_0669 | Swol_0039 | Swol_0669 | Swol_0039 | Agmatinase; KEGG: dsy:DSY0233 hypothetical protein; Belongs to the arginase family. | KEGG: mta:Moth_2265 Orn/Lys/Arg decarboxylase, major region. | 0.942 |
Swol_0669 | Swol_0667 | Swol_0669 | Swol_0667 | Agmatinase; KEGG: dsy:DSY0233 hypothetical protein; Belongs to the arginase family. | Arginine decarboxylase; KEGG: chy:CHY_1622 pyruvoyl-dependent arginine decarboxylase. | 0.968 |
Swol_0669 | speE | Swol_0669 | Swol_0668 | Agmatinase; KEGG: dsy:DSY0233 hypothetical protein; Belongs to the arginase family. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.970 |
speE | Swol_0666 | Swol_0668 | Swol_0666 | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | KEGG: chy:CHY_1527 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.433 |
speE | Swol_0667 | Swol_0668 | Swol_0667 | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | Arginine decarboxylase; KEGG: chy:CHY_1622 pyruvoyl-dependent arginine decarboxylase. | 0.754 |
speE | Swol_0669 | Swol_0668 | Swol_0669 | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | Agmatinase; KEGG: dsy:DSY0233 hypothetical protein; Belongs to the arginase family. | 0.970 |