STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0676KEGG: dsy:DSY2235 hypothetical protein; Belongs to the FPP/GGPP synthase family. (252 aa)    
Predicted Functional Partners:
Swol_2536
KEGG: dsy:DSY5032 hypothetical protein.
  
     0.762
Swol_1786
KEGG: mta:Moth_2110 hypothetical protein.
  
     0.743
Swol_0864
KEGG: dsy:DSY2979 hypothetical protein.
  
    0.731
Swol_0460
KEGG: dsy:DSY3269 hypothetical protein.
  
     0.727
Swol_0458
KEGG: pfa:PF10_0351 hypothetical protein.
 
     0.726
Swol_0052
KEGG: tte:TTE1657 hypothetical protein.
  
     0.722
Swol_0441
KEGG: chy:CHY_1645 hypothetical protein.
  
     0.722
Swol_1202
Hypothetical protein; KEGG: cac:CAC3587 DNA replication protein DnaD.
  
     0.718
Swol_1434
KEGG: mta:Moth_1703 hypothetical protein.
  
     0.716
Swol_0973
KEGG: dsy:DSY1594 hypothetical protein; Belongs to the UPF0342 family.
  
     0.712
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.