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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etfBElectron transfer flavoprotein, beta subunit; Part of an electron transfer flavoprotein involved in syntrophic growth of S.wolfei with butyrate. Probably receives electrons from butyryl-CoA dehydrogenases, and transfers them to the membrane-bound quinone oxidoreductase Swol_0698. Belongs to the ETF beta-subunit/FixA family. (252 aa)    
Predicted Functional Partners:
etfA
Electron transfer flavoprotein, alpha subunit; Part of an electron transfer flavoprotein involved in syntrophic growth of S.wolfei with butyrate. Probably receives electrons from butyryl-CoA dehydrogenases, and transfers them to the membrane-bound quinone oxidoreductase Swol_0698. Belongs to the ETF alpha-subunit/FixB family.
 0.998
Swol_0266
KEGG: dsy:DSY3797 hypothetical protein.
 0.986
Swol_2121
KEGG: pai:PAE3587 electron transfer flavoprotein alpha subunit.
 
 0.980
Swol_2123
KEGG: dsy:DSY0945 hypothetical protein.
 
 0.917
Swol_0788
KEGG: bce:BC5342 acyl-CoA dehydrogenase, short-chain specific.
 
 
 0.915
Swol_0698
Putative iron-sulfur-binding reductase; Oxidoreductase involved in syntrophic growth of S.wolfei with butyrate. Is presumed to link the electron flow from butyryl-CoA dehydrogenases to the membrane, in conjunction with the electron transfer flavoprotein EtfAB. May transfer electrons to the menaquinone pool of the membrane.
 
  
 0.909
Swol_1483
butyryl-CoA dehydrogenase; KEGG: dsy:DSY1568 hypothetical protein.
 
 
 0.857
Swol_1933
Conserved hypothetical protein; Involved in syntrophic growth of S.wolfei with butyrate, as part of the butyrate oxidation pathway. Catalyzes the oxidation of butanoyl-CoA to crotonyl-CoA. Probably passes the electrons released by this reaction on to electron-transfer flavoproteins (EtfAB) to finally generate hydrogen and/or formate.
 
 
 0.850
Swol_1841
KEGG: chy:CHY_1350 butyryl-CoA dehydrogenase.
 
 
 0.848
Swol_0488
KEGG: tte:TTE0545 Acyl-CoA dehydrogenases.
 
 
 0.845
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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