Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Swol_0227 | Swol_0711 | Swol_0227 | Swol_0711 | KEGG: mbu:Mbur_1591 polysaccharide biosynthesis protein CapD. | KEGG: bbr:BB0122 DegT/DnrJ/EryC1/StrS aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.589 |
Swol_0227 | Swol_0716 | Swol_0227 | Swol_0716 | KEGG: mbu:Mbur_1591 polysaccharide biosynthesis protein CapD. | Pyridoxal phosphate-dependent enzyme; Apparently involved in regulation of cell wall biogenesis-like protein; KEGG: lic:LIC12168 aspartate aminotransferase. | 0.518 |
Swol_0227 | Swol_1908 | Swol_0227 | Swol_1908 | KEGG: mbu:Mbur_1591 polysaccharide biosynthesis protein CapD. | Glycosyltransferases involved in cell wall biogenesis-like protein; KEGG: pca:Pcar_1758 putative glycosyl transferase. | 0.473 |
Swol_0704 | Swol_0706 | Swol_0704 | Swol_0706 | KEGG: pgi:PG0002 hexapeptide transferase family protein. | KEGG: bbr:BB0155 probable oxidoreductase. | 0.809 |
Swol_0704 | Swol_0707 | Swol_0704 | Swol_0707 | KEGG: pgi:PG0002 hexapeptide transferase family protein. | KEGG: aae:aq_1335 nucleotide sugar epimerase. | 0.438 |
Swol_0704 | Swol_0710 | Swol_0704 | Swol_0710 | KEGG: pgi:PG0002 hexapeptide transferase family protein. | KEGG: cbu:CBU_0829 NAD dependent epimerase/dehydratase family protein. | 0.496 |
Swol_0704 | Swol_0711 | Swol_0704 | Swol_0711 | KEGG: pgi:PG0002 hexapeptide transferase family protein. | KEGG: bbr:BB0122 DegT/DnrJ/EryC1/StrS aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.664 |
Swol_0704 | Swol_0712 | Swol_0704 | Swol_0712 | KEGG: pgi:PG0002 hexapeptide transferase family protein. | KEGG: bbr:BB0123 putative asparagine synthetase. | 0.513 |
Swol_0704 | Swol_0716 | Swol_0704 | Swol_0716 | KEGG: pgi:PG0002 hexapeptide transferase family protein. | Pyridoxal phosphate-dependent enzyme; Apparently involved in regulation of cell wall biogenesis-like protein; KEGG: lic:LIC12168 aspartate aminotransferase. | 0.536 |
Swol_0704 | Swol_1908 | Swol_0704 | Swol_1908 | KEGG: pgi:PG0002 hexapeptide transferase family protein. | Glycosyltransferases involved in cell wall biogenesis-like protein; KEGG: pca:Pcar_1758 putative glycosyl transferase. | 0.568 |
Swol_0706 | Swol_0704 | Swol_0706 | Swol_0704 | KEGG: bbr:BB0155 probable oxidoreductase. | KEGG: pgi:PG0002 hexapeptide transferase family protein. | 0.809 |
Swol_0706 | Swol_0707 | Swol_0706 | Swol_0707 | KEGG: bbr:BB0155 probable oxidoreductase. | KEGG: aae:aq_1335 nucleotide sugar epimerase. | 0.507 |
Swol_0706 | Swol_0711 | Swol_0706 | Swol_0711 | KEGG: bbr:BB0155 probable oxidoreductase. | KEGG: bbr:BB0122 DegT/DnrJ/EryC1/StrS aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.723 |
Swol_0706 | Swol_0716 | Swol_0706 | Swol_0716 | KEGG: bbr:BB0155 probable oxidoreductase. | Pyridoxal phosphate-dependent enzyme; Apparently involved in regulation of cell wall biogenesis-like protein; KEGG: lic:LIC12168 aspartate aminotransferase. | 0.576 |
Swol_0706 | Swol_1908 | Swol_0706 | Swol_1908 | KEGG: bbr:BB0155 probable oxidoreductase. | Glycosyltransferases involved in cell wall biogenesis-like protein; KEGG: pca:Pcar_1758 putative glycosyl transferase. | 0.444 |
Swol_0707 | Swol_0704 | Swol_0707 | Swol_0704 | KEGG: aae:aq_1335 nucleotide sugar epimerase. | KEGG: pgi:PG0002 hexapeptide transferase family protein. | 0.438 |
Swol_0707 | Swol_0706 | Swol_0707 | Swol_0706 | KEGG: aae:aq_1335 nucleotide sugar epimerase. | KEGG: bbr:BB0155 probable oxidoreductase. | 0.507 |
Swol_0707 | Swol_0711 | Swol_0707 | Swol_0711 | KEGG: aae:aq_1335 nucleotide sugar epimerase. | KEGG: bbr:BB0122 DegT/DnrJ/EryC1/StrS aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.679 |
Swol_0707 | Swol_1908 | Swol_0707 | Swol_1908 | KEGG: aae:aq_1335 nucleotide sugar epimerase. | Glycosyltransferases involved in cell wall biogenesis-like protein; KEGG: pca:Pcar_1758 putative glycosyl transferase. | 0.646 |
Swol_0707 | Swol_2137 | Swol_0707 | Swol_2137 | KEGG: aae:aq_1335 nucleotide sugar epimerase. | KEGG: gvi:gll3084 mannose-1-phosphate guanyltransferase. | 0.457 |
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