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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0747Hypothetical protein. (206 aa)    
Predicted Functional Partners:
Swol_0034
KEGG: mta:Moth_0031 SigmaK-factor processing regulatory BofA.
  
     0.687
Swol_1919
KEGG: tma:TM1852 hypothetical protein.
  
     0.662
Swol_0746
KEGG: bcz:BCZK0834 hypothetical protein.
       0.661
Swol_0190
Anti-sigma-28 factor, FlgM; KEGG: dvu:DVU0523 negative regulator of flagellin synthesis FlgM.
 
     0.650
Swol_0854
KEGG: tte:TTE1437 hypothetical protein.
  
     0.615
Swol_0525
KEGG: sat:SYN_01761 pilin assembly protein.
  
     0.603
Swol_2165
KEGG: tte:TTE0834 hypothetical protein.
  
     0.587
Swol_0191
Hypothetical protein.
 
     0.574
Swol_1202
Hypothetical protein; KEGG: cac:CAC3587 DNA replication protein DnaD.
  
     0.566
Swol_0754
KEGG: mta:Moth_1793 hypothetical protein.
 
     0.558
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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