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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0749KEGG: mta:Moth_0681 hypothetical protein. (122 aa)    
Predicted Functional Partners:
Swol_0748
KEGG: mta:Moth_0181 hypothetical protein.
     0.990
Swol_2497
KEGG: syf:Synpcc7942_0443 hypothetical protein.
  
     0.727
Swol_0130
KEGG: mta:Moth_2364 peptidase S8 and S53, subtilisin, kexin, sedolisin.
  
     0.706
Swol_0131
KEGG: mta:Moth_2363 putative transmembrane transcriptional regulator (anti-sigma factor).
  
     0.670
Swol_0755
KEGG: dsy:DSY3327 hypothetical protein.
  
     0.657
Swol_1742
KEGG: mta:Moth_0243 hypothetical protein.
  
     0.645
Swol_1924
KEGG: mta:Moth_0656 hypothetical protein.
  
     0.633
Swol_1043
Hypothetical protein; KEGG: mta:Moth_1459 Ig-like, group 2.
  
     0.624
Swol_1260
Hypothetical protein; KEGG: btk:BT9727_0789 possible S-layer protein.
  
     0.620
Swol_0317
KEGG: mta:Moth_0243 hypothetical protein.
  
     0.586
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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