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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0752KEGG: hypothetical protein. (106 aa)    
Predicted Functional Partners:
Swol_0753
KEGG: mta:Moth_1792 hypothetical protein.
 
     0.827
Swol_0754
KEGG: mta:Moth_1793 hypothetical protein.
 
     0.694
Swol_2165
KEGG: tte:TTE0834 hypothetical protein.
  
     0.659
Swol_0127
Hypothetical protein; KEGG: mta:Moth_1253 O-antigen polymerase.
  
     0.629
Swol_0460
KEGG: dsy:DSY3269 hypothetical protein.
  
     0.555
Swol_2187
KEGG: cac:CAC2776 hypothetical protein.
  
     0.530
Swol_0945
KEGG: ddi:DDB0204067 hypothetical protein.
  
     0.515
Swol_1384
KEGG: bld:BLi02112 hypothetical protein.
  
     0.513
Swol_2063
KEGG: bca:BCE5566 hypothetical protein.
 
     0.512
Swol_2188
Hypothetical protein.
  
     0.508
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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