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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0760KEGG: cac:CAC2365 small acid-soluble spore protein. (67 aa)    
Predicted Functional Partners:
gpr
GPR endopeptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.758
Swol_0834
Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
     0.700
Swol_0080
KEGG: mta:Moth_0083 transcriptional regulator, AbrB family.
  
  
 0.691
Swol_0063
KEGG: tte:TTE2552 pro-sigma-E processing factor spoIIR.
  
   
 0.690
Swol_0627
KEGG: mta:Moth_1375 stage V sporulation AD.
  
  
 0.679
Swol_1567
KEGG: mta:Moth_0592 putative stage IV sporulation YqfD.
 
     0.677
Swol_0552
KEGG: tte:TTE1285 hypothetical protein.
  
     0.669
Swol_0550
KEGG: tte:TTE1283 stage III sporulation protein spoIIIAA.
  
   
 0.667
Swol_0626
KEGG: tte:TTE1319 spore formation protein spoVAC.
  
  
 0.662
Swol_1267
ATP-dependent Clp protease proteolytic subunit ClpP; KEGG: mta:Moth_1071 peptidase S14, ClpP.
  
     0.660
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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