Swol_0769 protein (Syntrophomonas wolfei Goettingen)

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Swol_0769

Metal-binding possibly nucleic acid-binding protein-like protein; KEGG: mta:Moth_0941 protein of unknown function DUF177. (186 aa)

Predicted Functional Partners:

rpmF

0.988

rplK

0.933

rpsC

0.917

rplA

0.830

rpsP

0.794

rpsD

0.790

rpsF

0.785

rpsB

0.784

infC

0.784

rplU

0.779

Your Current Organism:

Syntrophomonas wolfei Goettingen

NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Swol_0769	infC	Swol_0769	Swol_1090	Metal-binding possibly nucleic acid-binding protein-like protein; KEGG: mta:Moth_0941 protein of unknown function DUF177.	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	0.784
Swol_0769	rplA	Swol_0769	Swol_2345	Metal-binding possibly nucleic acid-binding protein-like protein; KEGG: mta:Moth_0941 protein of unknown function DUF177.	LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.830
Swol_0769	rplK	Swol_0769	Swol_2346	Metal-binding possibly nucleic acid-binding protein-like protein; KEGG: mta:Moth_0941 protein of unknown function DUF177.	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.933
Swol_0769	rplU	Swol_0769	Swol_1613	Metal-binding possibly nucleic acid-binding protein-like protein; KEGG: mta:Moth_0941 protein of unknown function DUF177.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.779
Swol_0769	rpmF	Swol_0769	Swol_0770	Metal-binding possibly nucleic acid-binding protein-like protein; KEGG: mta:Moth_0941 protein of unknown function DUF177.	KEGG: chy:CHY_1453 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.988
Swol_0769	rpsB	Swol_0769	Swol_0882	Metal-binding possibly nucleic acid-binding protein-like protein; KEGG: mta:Moth_0941 protein of unknown function DUF177.	KEGG: chy:CHY_1787 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.784
Swol_0769	rpsC	Swol_0769	Swol_2327	Metal-binding possibly nucleic acid-binding protein-like protein; KEGG: mta:Moth_0941 protein of unknown function DUF177.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.917
Swol_0769	rpsD	Swol_0769	Swol_2305	Metal-binding possibly nucleic acid-binding protein-like protein; KEGG: mta:Moth_0941 protein of unknown function DUF177.	SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.790
Swol_0769	rpsF	Swol_0769	Swol_2540	Metal-binding possibly nucleic acid-binding protein-like protein; KEGG: mta:Moth_0941 protein of unknown function DUF177.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.785
Swol_0769	rpsP	Swol_0769	Swol_1497	Metal-binding possibly nucleic acid-binding protein-like protein; KEGG: mta:Moth_0941 protein of unknown function DUF177.	KEGG: dsy:DSY2598 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.794
infC	Swol_0769	Swol_1090	Swol_0769	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Metal-binding possibly nucleic acid-binding protein-like protein; KEGG: mta:Moth_0941 protein of unknown function DUF177.	0.784
infC	rplA	Swol_1090	Swol_2345	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.964
infC	rplK	Swol_1090	Swol_2346	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.965
infC	rplU	Swol_1090	Swol_1613	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.948
infC	rpmF	Swol_1090	Swol_0770	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	KEGG: chy:CHY_1453 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.832
infC	rpsB	Swol_1090	Swol_0882	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	KEGG: chy:CHY_1787 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.970
infC	rpsC	Swol_1090	Swol_2327	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.985
infC	rpsD	Swol_1090	Swol_2305	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.933
infC	rpsF	Swol_1090	Swol_2540	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.981
infC	rpsP	Swol_1090	Swol_1497	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	KEGG: dsy:DSY2598 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.934

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