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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0785KEGG: dsy:DSY3969 NADH dehydrogenase I chain G. (353 aa)    
Predicted Functional Partners:
Swol_0657
NADH dehydrogenase (quinone); KEGG: tko:TK1613 NADH:ubiquinone oxidoreductase, NADH-binding subunit F.
 
 0.994
Swol_0786
KEGG: sth:STH3295 formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     0.990
Swol_1028
KEGG: dsy:DSY3968 putative formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.985
Swol_1018
NADH dehydrogenase (quinone); KEGG: chy:CHY_0732 Fe-hydrogenase, beta subunit.
 
 0.974
Swol_1830
KEGG: dsy:DSY3968 putative formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.974
Swol_1701
NADH dehydrogenase (quinone); KEGG: det:DET0729 [Fe] hydrogenase, HymB subunit, putative.
 
 
 0.965
Swol_1017
KEGG: mta:Moth_1717 iron hydrogenase, small subunit.
 
 
0.959
Swol_1024
NADH dehydrogenase (quinone); KEGG: tte:TTE0893 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit.
 
 0.955
Swol_1828
NADH dehydrogenase (quinone); KEGG: chy:CHY_0732 Fe-hydrogenase, beta subunit.
 
 0.954
Swol_0656
NADH:ubiquinone oxidoreductase 24 kD subunit-like protein; KEGG: tko:TK1614 NADH:ubiquinone oxidoreductase, subunit E.
 0.947
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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