STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pheAPrephenate dehydratase; KEGG: aae:aq_951 chorismate mutase/prephenate dehydratase. (278 aa)    
Predicted Functional Partners:
Swol_1349
KEGG: mta:Moth_1333 prephenate dehydrogenase.
 
 
 0.952
Swol_0809
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; KEGG: mta:Moth_1335 phospho-2-dehydro-3-deoxyheptonate aldolase.
 
  
 0.940
Swol_2093
Aminotransferase; KEGG: pca:Pcar_1888 aspartate aminotransferase.
 
 
 0.925
hisC
KEGG: mta:Moth_0515 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
 
 0.918
hisC-2
KEGG: mta:Moth_0515 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
 
 0.918
Swol_1395
Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.
    
 0.917
Swol_1205
Aminotransferase; KEGG: chy:CHY_0115 putative aspartate aminotransferase.
 
 
 0.875
Swol_0363
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; KEGG: mta:Moth_1335 phospho-2-dehydro-3-deoxyheptonate aldolase.
 
  
 0.725
Swol_1388
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; KEGG: tte:TTE1013 phospho-2-dehydro-3-deoxyheptonate aldolase.
 
  
 0.703
Swol_1381
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; KEGG: dsy:DSY2264 hypothetical protein.
 
  
 0.684
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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