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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0857KEGG: mta:Moth_0778 hypothetical protein. (98 aa)    
Predicted Functional Partners:
Swol_0858
KEGG: bbu:BB0283 flagellar hook protein.
  
    0.820
Swol_0855
KEGG: tte:TTE1436 putative flagellar hook-length control protein FliK.
 
    0.818
Swol_0876
KEGG: bha:BH2434 inhibition of CheR-mediated methylation of MCPs.
 
     0.795
Swol_0856
KEGG: bsu:BG10248 similar to flagellar hook assembly protein.
  
    0.735
Swol_0862
CheC, inhibitor of MCP methylation; KEGG: dsy:DSY2981 hypothetical protein.
 
    0.735
Swol_0854
KEGG: tte:TTE1437 hypothetical protein.
  
    0.649
Swol_0861
KEGG: dsy:DSY2982 hypothetical protein.
 
    0.628
Swol_0851
Flagellar biosynthesis/type III secretory pathway protein-like protein; KEGG: mta:Moth_0773 flagellar assembly protein FliH.
 
    0.598
Swol_0863
KEGG: bcl:ABC2256 two-component response regulator of modulation of flagellar.
 
     0.569
Swol_0859
Hypothetical protein; KEGG: tte:TTE1432 uncharacterized protein, possibly involved in motility.
       0.510
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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